Posts tagged federated analysis
CINECA Poster - GA4GH 9th Plenary

In collaboration with other GA4GH-associated projects, CINECA is developing infrastructure which will permit effective use of widely-dispersed data increasing the size and quality of datasets available for disease research. In alignment with community standards, using standardised interfaces, data analysis will be federated and migrated to the data, respecting data access restrictions.
Solutions CINECA is adopting from the Discovery Work Stream include the Data Connect and Beacon v2 API, while from the DURI and Data Security Work Streams the GA4GH Passports, AAI and DUO are being utilised.

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Joint Variant genotyping use case

Recently WP4 has delivered a simple demonstrator pipeline to perform a federated joint variant genotyping analysis. The goal of this use case is to demonstrate how a simple metric (in this case, allele frequency) can be computed in a federated manner, without requiring ever collecting the individual level data in a central location.

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